GrainGenes Sequence Report: Ta.10390.2.A1_a_at
Sequence
BQ169461
Contig
Ta.10390.1.S1_at Ta.10390.2.A1_a_at NSFT03P2_Contig14500
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC349669
wEST map position
BQ169461
NCBI UniGene
Ta.44783
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001062479.1 Os08g0556900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
3AL 3BL
Clone Library
Wheat pre-anthesis spike cDNA library
Tissue
Spike before anthesis
Developmental Stage
Adult plant
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE2306_D08_G16ZT Wheat pre-anthesis spike cDNA library Triticum aestivum cDNA clone WHE2306_D08_G16, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE2306_D08_G16
Probe
WHE2306_D08_G16
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Whole spike with awns trimmed, white, green and yellow anther were collected and total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tttttttttttttttttttttttcacaaaaaaaatgacaggatatataat
gtaaaccgtttagatacaaatcggtcgaaaccgcagtacatgtatgataa
ttaagtatagtgcaactaatatatgtgatgggtacatatcaattgattgt
ttatttatttttcccttgcgataatgccctgatcatgcatattaggggcc
aataattagttagataatcgatgagagattcagacttcagagctcgtcat
gggcaccggcatgcttcgggttggctgaggtcttgacggggtaggatgcc
tccatggggatgccgcagagcccctccttgtcttccacatcgcgcttc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Ta.10390.2.A1_a_at
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||