GrainGenes Sequence Report: Ta.7486.1.A1_s_at
Sequence
BQ170865
Contig
Ta.7486.1.A1_s_at NSFT03P2_Contig3949
External Databases
Data at GenBank Data at EMBL Data at DDBJ
wEST map position
BQ170865
NCBI UniGene
Ta.39737
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to NP_001067219.1 Os12g0604700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
5AS 5BS 5DS 6DL
Clone Library
Wheat pre-anthesis spike cDNA library
Tissue
Spike before anthesis
Developmental Stage
Adult plant
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE2309_F05_K09ZT Wheat pre-anthesis spike cDNA library Triticum aestivum cDNA clone WHE2309_F05_K09, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE2309_F05_K09
Probe
MAG1280 WHE2309_F05_K09
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Whole spike with awns trimmed, white, green and yellow anther were collected and total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
ttttttttttttttttttgaggatcatggcatgattgaaatggggcaagg
caggcagcatggctacaagggttcaaggtcttgccggatccagggttcca
acttagcagtacaattctactactactactagtgctactagtgcttctac
tgctgctactagtgaactggggttacttactagctatagctaacaagtta
gggaaacagcaacactgagatggtgtttgctttggtcccagcagctaaac
ttcaggcctaacaccgatttaattcaactacctcagctacgttcgggtcg
ggtcgcgcatcacgttacaaaaatggcgaccgaccgaccgtggagacggg
cgctgccgctacgtcgtctccttgaagctctttgagagccagatggccgt
ctccctgggggacgccttctcggggccgaacggcttcagcaggatcccca
gctcgtcgtacctctcctgctgcagcagctgcgcgctgaactccagcagc
ccctccagcgcctc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Ta.7486.1.A1_s_at
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||