GrainGenes Sequence Report: BQ171796

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Sequence

BQ171796

External Databases

TIGR Gene Index

wEST map position

BQ171796

NCBI UniGene

Ta.41900

DB Remark

Locus Source: Triticum aestivum (bread wheat)

UniGene title 'Transcribed locus, strongly similar to NP_001064264.1 Os10g0187500 [Oryza sativa (japonica cultivar-group)]'

Keyword

EST

Species

Triticum aestivum

Cultivar

Chinese Spring

Chromosome

7AL

7BL

7DL

Clone Library

Wheat heat stressed flag leaf cDNA library

Tissue

Flag leaf

Developmental Stage

Full tillering stage

Data Source

genbank	Release 135, Apr 15 2003
genbank	Updated Nov 2006

Title

WHE1659-1662_O04_O04ZT Wheat heat stressed flag leaf cDNA library Triticum aestivum cDNA clone WHE1659-1662_O04_O04, mRNA sequence.

Strain

lab_host E. coli SOLR

Clone

WHE1659-1662_O04_O04

Probe

MAG1754

WHE1659-1662_O04_O04

Remark

DB_xref: taxon:4565

Feature: source: mol_type = 'mRNA';

Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer.

Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants at full-tillering stage were heat stressed under four conditions: (1) 38 C for 2 hours, (2) 38 C for 4 hours, (3) 2 days of cyclic treatment of 38 C for 2 hours, (4) 2 days of cyclic treatment of 38 C for 4 hours, at Texas Tech University (D Zhang in Nguyen lab). Total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton, Malatrasi) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).

DNA

tttttttttcccccccacgggagagctttatacataattattagcaagtg
acaaaggcgtaaactaaaacgtgtaccggacggaacgataaacatatctc
agggcacaaggttaggtggttaacaaaaccctttgcatctaagcaagaac
ctaaaacaaactcaccgaactttcttccgggatttgtaatggaacccacc
gggtggggacggcaaaaactctagcgggaggtgaggcggctctccct


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