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GrainGenes Sequence Report: Ta.12346.1.A1_at

Sequence	BQ172156
Contig	Ta.12346.1.A1_at
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC328712
wEST map position	BQ172156
NCBI UniGene	Ta.12346
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001055512.1 Os05g0406100 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	1AL 1BL 1DL
Clone Library	Chinese Spring wheat drought stressed leaf cDNA library
Tissue	Leaf
Developmental Stage	Full tillering stage
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE2001_G02_M03ZT Chinese Spring wheat drought stressed leaf cDNA library Triticum aestivum cDNA clone WHE2001_G02_M03, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE2001_G02_M03
Probe	WHE2001_G02_M03
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were given a gradual stress down to 80%, 70% and to 60% RWC at Texas Tech University (D. Zhang in HT Nguyen lab). Total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab at the University of California, Riverside (Akhunov, Chin, Choi, Close, Fenton , Kianian, Otto, Simons, Zhang). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were given a gradual stress down to 80%, 70% and to 60% RWC at Texas Tech University (D. Zhang in HT Nguyen lab). Total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab at the University of California, Riverside (Akhunov, Chin, Choi, Close, Fenton, Kianian, Otto, Simons, Zhang). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	ttttttttttttttttttttttttttttttttttaaaacaaaaacatcag tgctctttcataaaagtgtaactctattaaatcttccttttactttgacg ctaagatgactaaatattctgttctccatgtggactttttggtatctaat ctttaattcatcttaagctataccactataagaatttgttatgtccaggc cctgaattatttggtggcctgctccaaattgccttttgttcttcaaagct cgcaacgttggcagactgtttcttgttcgttaaagaatttgccaatcgat tgtaatatatttcaacattgaaatcacttaacacctgcaccagctttgta ctctgcttactgatcacaatctgcccatctgtgtttttcattgtgtcggc aaggacgcttatttgcttcagctttactgtggatttcaagtcagatcctt gaaccatgtaaaccgcaccaagaacttctcccaaaaatatatccac

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