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GrainGenes Sequence Report: BU991817

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Sequence
BU991817
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC163465
NCBI UniGene
Hv.14007
DB Remark
Locus Source: Hordeum vulgare
UniGene title 'Transcribed locus, strongly similar to NP_001060695.1 Os07g0687700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Hordeum vulgare
Cultivar
Golden Promise
Clone Library
HD
Tissue
callus
Developmental Stage
callus (5-10 mm in diameter)
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
HD08A12r HD Hordeum vulgare cDNA clone HD08A12 5-PRIME, mRNA sequence.
Strain
lab_host XL10-Gold
Clone
HD08A12
Probe
GBR1550
Remark
DB_xref: taxon:4513
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Stein Nils; Molecular Markers Group, Department Genbank; Institute of Plant Genetics and Crop Plant Research (IPK); Corrensstr. 3, 06466, Gatersleben, Germany; Tel: 039482-5522; Fax: 039482-5595; Email: stein@ipk-gatersleben.de; Insert Length: 626 Std Error: 0.00; Plate: 8 row: A column: 12; Seq primer: M13rev.
Note: Vector: pBluescript SK+; Site_1: EcoRI (5'-end of cDNA); Site_2: XhoI (3'-end of cDNA); Due to a cloning artefact caused by the kit, in most cases the EcoRI site is NOT present, as well as the EcoRIadapter used for cloning. To excise the insert, restriction sites upstream EcoRI should be used (e.g. BamHI, SalI,PstI). NOTE: Also due to the cloning system used Blue/white selection for recombinats is not 100% reliable.Average insert size is 1 kb
DNA
cggacgaggccacctcagcaatcttccagcaggcagaggatgcactgtca
caagggatggaagcattgcagcaatcactggcagagactttggctggatc
tctgggttcctcctctggttcttcagggaatgttgcaaactacatgggtc
agatggccatggccatgggcaagcttggaacactcgagaactttcttcgc
caggctgacaacctgcgacagcagaccttgcatcaaatgcagcgaatctt
gacgatccgtcaggcctcccgtgcccttctagctatacatgactacttct
cgcgtttgcgcgcgctgagctctctgtggcttgctaggcccagggaataa
ccaaggatcgctcgctcgccggatttcccccaagctgatctgtacaacgc
tgggggctctcttcatattgctgcagataatttgggtattcgagtttttc
tttcttgtataattatgtgtagctgctttttgggtccagggtttgttgta
ctcgggtggtatacaagtaggtggggggagcctgtaagttacaatggttg
tagaactgtgttgggaataaaaactagataagtcaggacgggtcctaatt
aagtcgtgtctcggtactgtagtggc

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