GrainGenes Sequence Report: BV211401
Sequence
BV211401
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
STS
Species
Triticum aestivum
Clone Library
Wheat var Chinese Spring Genomic DNA
Data Source
genbank Release 145, Dec 15 2004
Title
BARC361 Wheat var Chinese Spring Genomic DNA Triticum aestivum STS genomic, sequence tagged site.
Probe
BARC361
Remark
DB_xref: taxon:4565 Feature: primer_bind: On complementary strand. Feature: source: mol_type = 'genomic DNA' Locus Comment: Synonyms: XBARC361; Contact: Dr. Perry Cregan; Soybean Genomics Improvement Laboratory; United States Department of Agriculture; BARC-WEST, Bldg. 006, Rm 100, 10300 Baltimore Ave., MD 20705, USA; Tel: 301-504-5070; Fax: 301-504-5728; Email: creganp@ba.ars.usda.gov; Primer A: TGCAGGCTAGATTGGGCGACGAT; Primer B: GTGGGGCCTAGGCAGTGGACG; STS size: 261; PCR Profile:; Presoak: 95 degrees C for 3.0 minute(s); Denaturation: 95 degrees C for 45 second(s); Annealing: 63 degrees C for 45 second(s); Polymerization: 72 degrees C for 45 second(s); PCR Cycles: 35; Thermal Cycler: Perkin Elmer TC or MJ PTC-225 or MBS; Satellite 384; Protocol:; Template: 30-100 ng; Primer: each 1.5 uM; dNTPs: each 200 uM; Taq Polymerase: 0.05 units/ul; Total Vol: 10 ul; Buffer:; MgCl2: 2.5 mM; KCl: 50 mM; Tris-HCl: 10 mM; pH: 8.3. Note: Vector: pBluescript; V-type: Plasmid; Genomic fragments cloned into pBluescript
EMBL Feature
primer_bind 92 114 Location: 92..114 primer_bind 332 352 Location: complement(332..352) STS 92 352 Location: 92..352
DNA
atgtccaccctccagatccccttgagccagtacaagcgtggggcatgaaa
catggcggatcagtgcatcgtggacgatggttcctattgattgcaggcta
gattgggcgacgattatgggctgggtgggtagggttttgggagggtacat
gtggtgcaccctttcttcggtcgccccgctggctatcggcgggtgctccg
acgacggcgatggaggttgtgtggggaacaactcgggtacaggttgttcg
aaatgaggtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagtg
agtgagtgagcgagtgagagcgagagagagacgtccactgcctaggcccc
acctatagtaagttgccgccgccccacctgtca
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BV211401
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||