GrainGenes Sequence Report: BV211628
Sequence
BV211628
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
STS
Species
Triticum aestivum
Clone Library
Wheat var Chinese Spring Genomic DNA
Data Source
genbank Release 145, Dec 15 2004
Title
BARC147 Wheat var Chinese Spring Genomic DNA Triticum aestivum STS genomic, sequence tagged site.
Probe
BARC147
Remark
DB_xref: taxon:4565 Feature: primer_bind: On complementary strand. Feature: source: mol_type = 'genomic DNA' Locus Comment: Synonyms: XBARC147; Contact: Dr. Perry Cregan; Soybean Genomics Improvement Laboratory; United States Department of Agriculture; BARC-WEST, Bldg. 006, Rm 100, 10300 Baltimore Ave., MD 20705, USA; Tel: 301-504-5070; Fax: 301-504-5728; Email: creganp@ba.ars.usda.gov; Primer A: GCGCCATTTATTCATGTTCCTCAT; Primer B: CCGCTTCACATGCAATCCGTTGAT; STS size: 105; PCR Profile:; Presoak: 95 degrees C for 3.0 minute(s); Denaturation: 95 degrees C for 45 second(s); Annealing: 52 degrees C for 45 second(s); Polymerization: 72 degrees C for 45 second(s); PCR Cycles: 35; Thermal Cycler: Perkin Elmer TC or MJ PTC-225 or MBS; Satellite 384; Protocol:; Template: 30-100 ng; Primer: each 1.5 uM; dNTPs: each 200 uM; Taq Polymerase: 0.05 units/ul; Total Vol: 10 ul; Buffer:; MgCl2: 2.5 mM; KCl: 50 mM; Tris-HCl: 10 mM; pH: 8.3. Note: Vector: pBluescript; V-type: Plasmid; Genomic fragments cloned into pBluescript
EMBL Feature
primer_bind 395 418 Location: complement(395..418) STS 1 418 Location: <1..418
DNA
actgggcacgtccacgggatggggccgatcctagcaacccactggactag
catgcaaccattgtatgaactctctagattgtttcccccgcaaaaaaaac
tctctagattgtttggattagtgatgtgaatgtgtgtccactctcttctt
tgctttcatctgaatctcacgacaattatttgttttagaaaaatgttgct
cttcaaaatcatttaaggacataattgcaatttcatttatccttcacgaa
tatgatttggttctctctcattttttaatagaatttttattcccagtgat
taaaattttgattccatttattcatgttcctcatcaagaagccaaaccac
acacacacacacacacacacacacaattttcaattcgataatgaatcaac
ggattgcatgtgaagcggatcgaactgacaaaaactttcaataatgtca
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BV211628
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||