Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA030698

[Submit comment/correction]

Sequence	AA030698
External Databases	Data at GenBank Data at EMBL Data at DDBJ
Germplasm	CC7277 (oat)
Species	Avena atlantica
Title	zEST00507 Maize Leaf, Stratagene #937005 Zea mays cDNA clone
Probe	AA030698
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CCCGCCTTCCCTCGGCTCTTCCCTCCCCTGCCATCACCGCACCACCACCT CCCCCGTCCACGGCTCCACTTCCGCGCTCACACCTTCCTTCCCTGTTCCT TCCCGTCCCGCCCAAACGCGAGATCTCGCAGCGCCGCCCGCCGCCCGGTC CACGCAGACCCTCGCGCGCGTGGCTTGAGCGGAGCCGAAGCAACCCGATA GCGCCGAGCCGGCAGGGCCAGATCGCCTGGTGCCCGGCGCTCAGGTGGGG CTAGATCCGCGAGATCCCGCGCACTGGTCCCAACTCCTCCGAGGTACAGT CGCGGGCACGCGTTCACTGGATCTCTTCGTCGTTCGACTCATTTCTGAGA CTTTGGAAGCTGTTTCGGGTAGCCTGGTCCTGTGATCCAGTGGTGTAGGT GGCAGCACGCTGTTGCGCTGCATTTGGTAGTGACTTAGCTGCTTTGCGTG ATTTTAGGGGGTTTTGTGATTCTTCATGGATTAGCTAATGTGTTTTTTAT TTTCACGGCAATGCTATTTTTGTTAATTTTCATTTGTGCTATGCAATGAA CGTTGTTGATTTGGACGGCAACACTAGGTACTGATACTTGCTAATAGTTT TCCAGTGATTAGTTCGCTTGTTCTAAATTTTAAGTGTCTTGGGACACAGG TGTGCGCAGGGAACCATTACATGTGAAGGCTAGAGTAATATATCTCTCTT GCCGGTGCTGTTTGTGCTGCTGCTGGTCCTGGTTGGTTTGAGAAGATGCA GAGAAATGGAGCGCTGGAATGCAGCGTCTGCCACTCCAAGGTGGTGGCTC CGAGTCCCAGGAGCATATCAAGGGCATATGACAAGCACAAGAGCAAGATA TCGTCCAAACAGCGCGTTCTCACATTCCTTCTCGTGGCTGGGGACTGCGT CTTAGTTGGCCTCCAGGTATTTCAGTATCGATGCTGATGTTTAACTTCAT GTTGTCTAAACAATGCCTGTTTGGATGAGATTGAGGCATAATTTTATTGA AAAAATGTAGCACAAGAATAAGTATCAAAATCCATGTTACATGCTTGTTG TGATACAGTACGATTTCGCCTGGTAGCCTGGCTCCTTTCCACGAGAACAT GCAGGTCATTCTCTAGTACTTTAAAGTTTGCTTGTGCTCAGCTTGTTGGA AAATGCTTTTCCTAATTTGCTAAAGATGGCAGGCATCTGCAGATTGTTAG AACATGTATATGAGTTAGGATAGACTAGGATTTTAGACCATATTATACTC CAAGTCTATCTTCCCCCTGTGTACCTCTTTATATACCACATGAGGTTCAT GGCAAAATTACACACGAAATAATTAGGGATCAAATTTTCTACATGGTATC AGAGCGGTTAGTATCATGACACCAATCCTAGGTTCTTTCACCACTTCGGC AGCGCGCTGCGCCCGGGGAGATTAATCTCTTCTCCTCGGGGGCACATCAT CCGGTTAAGATTAAAGATCTGATCGGTTTCTAGATTAGATTCGAATTCCC AGTTTTCTAACACAGATTTTGTTCTCTAGTGTTGCTATCAGATTCAACCA TTATCTCCCTTAAAAATACACACTCATCAATTTTCAAAAAGATTTATTGG CAGATCTGGTAACCCTTTTCCTAGAGTAAATACTAAATATATTTATGACT ATATATGTACCTTTTTGATGTTGAGTTCTGGGACAAACAGATAGCAAAGA TGCAGCATCTATCTGATTCCAGACAATTTGCAACTGTGCTAATTATTTGT TTTGCTCTGCAGCCTATCCTAGTCTTTATGTGCAAGGTTGATGGGAAGTT TAAGTTCAGTCCCATGAGCGTTAACTTTTTGACGGAAGTTGCAAAAGTTT TCTTTGCTATCATAATGCTAATAATCCAGGTTAGTTCTTTCTGACCCAGG CTTTCATTAGCTATTATTTTTGTGTTTCAAATCTTGTGAGTGTGTACAAG CCTGCAATGGACTATCATTTTTTAGTATATTTTTGCCCAACAGTAAATTA AAGTGTTGTAGGAACTACAATTTCATTTTAGATAAGAAAGACAACAAAAA AGCAATGGGTTTACACATTACAAGTTTTTGTTTGGTCTGTTGTGTTCAAG TGGTACCCTTTAATATTGCTGCTCTTCATTTTGACAGTCTAGAAAACAGA AGGTTGGGGAGAAGCCACTTCTGTCACTTTCGACCTTTGTACAGGTGATT TTTCTTTCAGAAGATAGAACATCTTGCACTCTTTTGTTGACACCTTGAGG TCCTTGACGATGCTCAGCATGCGCAAAAGTTAAGACGCTACTTGTGCTGC TAATGCTAAACAACATGTAGTGGAACAAGTGTTGCTCATCTCTATTGTAT TTATGCCCAACTGAGTTGCATGCAGTCTTCTTTTATCCTATTCATCGATT TATTTATTTAGTATATGCCTCTAACTTTTTGTTATGGCAACTAACCATTT TGTTCGTCAACCCTTTCCTGTGTAGGCAGCCCGTAACAATGTACTATTAG CTATTCCTGCTCTACTATATGCGATCAACAACTACCTAAAGTTTACCATG CAGGTAAAAGTTCATTGAACTAGCTGAAATCCCATTCTTACAATTTGGTA CTCTTGATATTTACGAAGCTTACTCTTGTCTTTACATGGTTTTCTGATAG GTATTACTCTTGTCTTTACATGCTTTTCTGATAGGTATTTTTAGTTATGC ATTACTTTCTTTTACTTGGTAAAGAAGGGATAAAAATTCTGTGAAGGAAG AAATCAAAGCCATTATATTAGGGGTGCAGCTGATGAATGCATTTAACCTT TTTTCTCCGGATTTGTTTTTTTTGAGTTTGGACATGGAGCCTTCGCTATC TTCTGGTGTGATTTATATTGTTGTTCTATGTTGAATCCATGCACACTTCT GCAATTTGTACCATAGGTTTTGGTATTTCCATACTAAATTGACCTTAGTT ACAAGTATTATACTAGTTCCTTTGGCTGTGTGCATCCCTAGATGCATAGG CCAAAAATGTTTCTTCCATTATCTAAAAAAATGCTGTTATACTTACCATG CAGTTATACTTCAACCCCTCGACAGTGAAGATGCTAAGCAACCTGAAGGT ACTCTTCTTTTTTGTATTTCCATCTTTTCATGCTAACGGTGCGGTGTCTG AGGATGTGTACTTGCCCTGTGTTTGGCAAATGCAAAATTGTTAATATCAT ACTTTCTGCTATACAATCCAGGTCCTCGTCATAGCTGTCCTCCTAAAATT AATAATGAGAAGGAAATTCTCTATAATTCAGGTGAGTATGAGCTTGGCAT CGCAGCTATTGATATATCTTCATTAAAGATAATTATTACAGTTATTATAA TGATTGTGCGGCTGTGTGCGCCTTAGAATTTATCTTCTTTAGGCATTTTT CAATATAAAAACTATTCATGGTTTCTTATGGAGAATTATTAGATTTATGC TACAGCTTTACTCTGCTAGAAGTTCCAAATCATTAGACAAGTTGCATGTT TGTTTTTGCCAGAGTTTTTTTTTCTGTATTTGGTGATCATTTTTCGTGAC CTCTGTGGTACCAATATAAATCTGTTGCTACCAATGATATTTGATATTTC AGCTGCAATGCCGAATTTGTTAAAAAATGAACCTTTTTTAAGGTCTAAAA ATGAACCTTGCTAATAGGTGCAACTTCAATAAAATCAAATGTAGAAAGAA CTAGTGCACACAAGTACGTGTTCTGCAAAATGATGTCACTCATATAATGT TGTTGACGATATTGATAAATGACCTCTTTTTTCTCTGATGGATATAGTGG GAAGCCCTCGCTCTGTTGCTTATTGGAATCAGCGTGAATCAACTACGCTC AATGCCCGAGGGCGCTAAAACTTTTGGTCTTCCAATCACCGCAATTGCAT ACATATACACACTAATATTTGTAAGTTTCTTCTTATTTATGTTGCTTCAA ATGACTGAACAATTATTGGACCCAAGGTTCATGCATACATATATTTATGT GAAATTGTAGGTTACCGTCCCGTCGTTTGCCTCTGTCTACAATGAGTATG CGTTGAAAAGCCAGTTCGACACAAGCATCTATCTGCAGGTAATTTCAGCT AAAGTCTTGGCTTCCTGCACTTTCAAATAATGATATTCCTCATGCATAAT TTGTTTTCTGCCTGGAAACAATAAATTGATAGCATATGGTTCCTTATCAT GTCATTTTATGCTTACCAGTTCGGACTGATATGAGATATGCACTTACCAC ATTTCCTTTTTTCTCTGTTATTTTTGTCTTCAATTCACACCAACTCTTTA ACATAATTTTCAGAATGTGTTTCTGTATGGATATGGTGCAATTTTTAACT TCCTTGGCATCCTAGGGACTGTCATATTTCAAGGTAAGCATCTGACATGA AAACTTACTTTCCTTGGCAATACATAAGGCTGTTATCCACTATGACTGTT GTACCTGAAACTCAATATGGCTGTGGCTTGGCAATATGGTTGTACCTGAA ACTCTATATGGTATTTTCCAAGTATTTTTCAGTTTTACAAACCGCATGGT AGGGGTTTCTATATTTCCTTTGAGGTTACAAAGAAAATGCAATTTAAATG TCTGTTTAGTGCTAGATATATTGATCAACATGTTGTGCTGTGAACTATGG TTTGAGCATCGTAGATTCTACAGAAATGCCATAAGTTAAGAAATCGGGAA CGTAAGCCATGGGCCTCTTGCACATTGTTGTTGTTACATATTTGAACACC ATCGAATTATTTCATGAATGTCCTGCCATGTCTTATGTTTCCTTGTAAAT ATTGGCCATTGGAGCACAGACTATGTACGATGTAACTTTGCCCCATGTGT TTGCAGGGCCAGAGAGTTTTGATATTCTTCGAGGGCATTCAAGAGCCACA TTTTTTCTCATTTGTAACAATGCTGCGCAAGGAATACTCTCCTCATTCTT CTTTAAGTATGCAGGTAATGGATGATATACACATATAACTCTCTTATACA TATTAGTTTTACCTGACCTTGGCTTTTCTTCATAATGTCACTTCTGTATA TACACTTCTTTATATGATTTCATTATAGCATATTTCCGAATGATTAACTG AGATCATACTGCAGATACGATTTTGAAGAAGTACTCATCAACAGTGGCCA CAATTTTTACTGGTCTAGCATCTGCTGCATTTTTGGGACATACCTTGACT ATTAACTTTCTTCTAGGCATCTCAATAGTCTTTATTTCAATGCACCAGGT GATTGCTGTTTTTAATTCTTTAGCTTGCTGTGCCTAGTTGATTCTTGCTC CCAACTGAACTTATGTAAGAGTTATTTCTGTTCAGTTTTTCTCTCCACTA GCCAAAGTCAAAGATGACAAACCAGCTGGAACTTTAGAGTTGGAGAAACA TAGGTAAATATTCCTTTGGCCTTGTTTTTTCTACTTTATTTTAATGCCAT ATTAAGTATCGAAGTAACAACCTTATAATTTTTCTAATTACTTGGGAGTT GGAGTTACAACTGACTTGCCTGACATGGTGCTATATTGATACAAAACCGT TTAATTCTTTCTCTTGGCTAGCTCTGATGTGCATAATAACTGCTGTTAGC ACGAATTTGTGATGTTTGCAAATATTTCTGAACACTTAGTCTAATAAAGA TTTTCATTTCGCAGGTCATCCGATTCTTTTGTAAATATGACTGTTGGTGC TGATGATGTAAGTACCACATTGTTCGAGTAAATAATTTCTGGAATAACAT TCTTCTGTTATATTGACTTATTTAATATGCTGGCCATTATTTCAGGTAAG CCATCTTGGCCCAACTGATGATAGAAAACCGTTGCTGCCAACTTAACATT ATACTTGAGGTGAGTCTTGTACTTCTAATTTTCCTCATATAGAAAAACTC TGACCAACAGGCATAGAACCTGCGGCATTTCATTTAGAAGATACTACCGT GAACACCAGGGAGGCCAAGCACTGAACTCTGGTGGGCTGGGAGAGCACGA CCGCCTCTAGCCGGCTGAGTGATGCCCGGTTCTTCTCTTATGAGAGAAGC CAGTGGCTTACTTTGAAAATCATGCACTTAACAATTATTATGTTCTGAAC CTTGAATACAATAGTTTTGGAACTGTTCCTACATGGTGACACAACAGTAA AATTGTTGTTGAATGAGCAACCACTTGGTCGCCTCTCGACTTTAGCCATT TTAGTCAGAGTTTACAACTCTACATACATCCTCGATGTACTGGTAGTTGT CAGTGTTCAAGGCTGTAGAACAATTATGCTCATCATCAACACATAACCTA GAGTAGTCCTACTGGTTTGCAGCAACCTAATACTCTATATTGTTGTTTGT TAACAAAAAGAAAACACTCTCATCGTTCTATTATTCTATTGGACCAACAA AACCTAAAGTGCTCCTATATGGTATGGTTACATCAACCTAATAATCCGTA TTATAGGGTTGTAAACAAAAATAAAACATTACATTTGTTCTATCAATCGG TGCTATACTCAGCACACAATACTAAAAATCGTTAATAGGCATCTCATTCT CAAGAGTATTGATGAACTTCTTTCTCTTTTGTTCTGCAGGTAGATATAGA AGAAATTCTTTTGCCGTGAACCACACATTTTATGTAGCATGGTAGATCGA ACCATACACTCTTGTAAACTGTAAAAGCAAAGGAAATGTATTTATATGTA AGAGGCCATCCGATTTTTTGTTACTTTTTTCACCCCAACTTTCTTGGGTC AACAACTGAGGGCTGGCACATGTCACTTGTTCCATACAAATTCACTGATA TGAAATGGTAGTTCTTCTCCTTTTCATTTGGCAAAACTGATGTACTCCCT CTGTTCCAAATTAATTGACGCAGCTTTGGTCAGATTTGGTGTGCGACAAT TGATTTGGAAGGAGGGAATACTAATACTATGTTGTCAGCAGAATATCCAT TTGTGCTGACCATTTGAGCCATTAAATAACCACATAACTGATTTTCATGA CAAGCTCAATGCTCTGCTCAGCATCTGCCCATGAATGTTTCTCCACGCAA AAAAGAAAGAAAGAAAGATCTAAATATGACCATTTTATCATTATCATCTA CACATGTGCTTGAGCTTAAGAAACGTGCACGAATAAACTGTCCTATACAT TGTTTCTGTCGACAGACAATACCTTACATTCAACCAAAAACTCTAGACGT CTTTCTGTGCGTGGCAAGAACTGCTGCTCAGACATGGCTTGCGAGCATAG AAAGTAAACTGGCGTAGTTGGGCAAAAACTTCCTCCCCACACTATCATCA GACAACGCCCTGCTGGTCCCGCACGACGGCGTAGTTGATCACGCGGGCGA TGGTGCCCATGGACGGCCGGTAGGTGGGGTCGTACTGGAGGCACTGCACC GCGATTCTCCCAAGCTGCAGGGATCAAGGTACCAGATTTTGCAGGGTTAG ATTAGGCTAAATATGGAGATGGATTAACCATATGGAGAGGGAGTGAGACC TTCAGAGCTCCGGTAGGAGGGTACTGGTTGCCGAGCCTCGGGTCGATGCA TTCCTGAGCTCTGTCTTCTGTCAGCAGTGGAGATGCCTGGATGGGGGCAG AATGGAAAGTGCAAATGTGTTAGCACGTTGACTTATGTTCTTATTCAAAA ATTAGTTTTGAATTGCCGAGAATGTTCCGAGTTCGTATATATTATGTAGT ATGGGGTATGTGATTGCATTGTTCTTGTAGGAACACATGCCTGTTGCAGT TTGAAGCTACCCGAGAAAATGAAAAAAGTTCTTACTTATTGGCATTGAAT TACAGTTTGTGAATGAAGAAAGAAAAAAACTGATTAGTCTGCATCATGAA TACCTTGAACCTTTATAAACAAACCATTCCCTAAAAAAGCATCAATTGGT TCATTGTCAGTCAGTTAGGTTGCCATCACTTTGTAATTGACAATTTAGTC TAGCATGTCTCCTTAGCCTTCTTATGATTCTTATTCATTAATATCTGCAT GTCTCTTGGGGGGTGAGTGATCAACAAACGAGAAATGCTCAACCTGTCGA AATTATGAAGAAGAAAGATGCTCACCCAGTTGACCAGGCTTCGCTGCCCC TGCGGCAACGTCCGGTCCAACGGCTTCCTTCCCGTGAGGAGCTCGAGAAG AACGATGCCGAAGCTGTACACGTCGCTCTTGTCGGTCATCTGGCCCGACA TGGCGTACCTGCCCAATCGACTCAGCATTCAGTTCAGGAACTAAGCAAAT TATTAAGCAATATCAGTGCAGTGCATGGGTGTCACATACTCGGGCGCCTG GTAGCCGAAGGAGCCGAGCGTGTGCTCTGAGCGGTTGAGTCGCGCCATGT CGGCGGCCTGGCTGAACATGTTGTAGTCCGCGATCTTGGCCCTCATGCCG TCGAAGAGCAGCACGTTGGTGGAGCGCACGTCCTTGTGCGTCACCGCCGG CGACGCCTTCTCGTGCAGGTACTCCAGGCCCCTCGCCGAGTCCAGCGCGA TCTGCACCCTGTGCGCCCAGCTCAGCACCGGCCTCTCGTCCTCGTCCTCC CGCGCCCCCATGACTTCCCTCGGCCCTGCAATATGCATGGCGCCGCCGCG TGTCATACAGCGTATAACTCAAAAGCCAAGACCGGCCGCGTGTGTTCTGA AGTAGTACAGTATCCCGGCCGTACCGTGCAGGGCGTCGTGGAGGGTGCCC ATGGTGGCGCACTCGTAGACGAGCACGCGGAGGTCGCCGCTGACGGTGTA TCCGAGCAGGCGGACGAAGCTCTCGTGCCGCAGCTTGGACGCCACCGACA GCTGCCGGCGGAAGACGTCGTTGGAGGCGTGCTTGGACGGCTTCTCCAGC CGCTTCACCACGGCGAGCCTGGCGCTCCGCAGCGTCACCTTGTACACCTT GGCGTAGGACCCCTCCCCGACCAGCCTCTCGGCGGCGAAGTTGTCCGTTA GCTCGTTGATCTCCCGCAGCGCCACCGCCGGCACCTCCACGGTGAGCGGC TCGTCCTCCGCGGCCGGGGCAGCGCCGCCGCCGCGCGACCGTTTCCGTTT GTCTGGGAGAGCACGACGGGAGCGGAATCGGTTGAATGATGCTGAACTGC ATGCAAGGAAATTAATTGTTGGCACTGCACTACTACACAGTGCGCTACTA CTTACCGGCGGGCTCCAGCGGAGGGTAGGAGTAAAGGTCGTCGGGCGCCC TCCTCCCGAGCCGAGGCAAGCAGCCGCCGTCGGCGAAGAAGGTCTTCACG CTCTCCCACCACGTCATCCCGCCGGCGGCACAGAAGAAAGAGCAGCAAGT ACAGGTTCGAGCGAACGAAGGAAATGGCTAATGAGATGAGAGTGACTAGA TGTTGTCCGCTCTTGTATCTCACGGAATCTATCGGCACCGGTCGATCGAG TTGCTGAAAATTTTCCTGCCTACCTGCTTGTGGACGGTATCGCTGCAAGG AAGCTCACGGCGGCGACAGGCAGAGGGACCGTAGCGGACAAAGTTCCAAG ACTTGGAAACGAACAGGCGATATTTAGTGGACTCGCGCCAGTCGTCGTGA CTGACATCCTGCCGCGGAATTCCTACGCGTGCGAGGGACCCGCTAGCCTA GCTCCTGGAACGTACGAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.