Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: CA501996

[Submit comment/correction]

Sequence	CA501996
Contig	NSFT03P2_Contig8595
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC301745
NCBI UniGene	Ta.10464
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001118998.1 unknown protein [Arabidopsis thaliana]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Clone Library	Wheat meiotic anther cDNA library
Tissue	Anther
Developmental Stage	Meiotic stages pre-meiosis-metaphase I
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE4041_C10_E19ZT Wheat meiotic anther cDNA library Triticum aestivum cDNA clone WHE4041_C10_E19, mRNA sequence.
Strain	lab_host E. coli DH10B
Clone	WHE4041_C10_E19
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: T7 primer. Note: Vector: pSPORT1; Site_1: SalI; Site_2: NotI; Plants were grown in a glasshouse. Anther meiotic stage was determined by removing anthers from individual primary florets. One anther was sacrificed for microscopic staging , and if determined to be between (and including) meiotic stages pre-meiosis and metaphase I, the remaining two anthers were collected and pooled for library construction. The tissue, total RNA, and poly(A) RNA were prepared, cDNA synthesised, and directionally ligated into pSPORT1 by Tim Sutton in the P Langridge Lab at the Department of Plant Science, University of Adelaide, Waite Campus, Australia. Average insert size 1.5Kb. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: pSPORT1; Site_1: SalI; Site_2: NotI; Plants were grown in a glasshouse. Anther meiotic stage was determined by removing anthers from individual primary florets. One anther was sacrificed for microscopic staging, and if determined to be between (and including) meiotic stages pre-meiosis and metaphase I, the remaining two anthers were collected and pooled for library construction. The tissue, total RNA, and poly(A) RNA were prepared, cDNA synthesised, and directionally ligated into pSPORT1 by Tim Sutton in the P Langridge Lab at the Department of Plant Science, University of Adelaide, Waite Campus, Australia. Average insert size 1.5Kb. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	gaggacgagctggggccgtgagagtcgggcgggccgcgggcgtgctcacc gtgagcgcttggagcccacccacccacagtcccatacgacgcacgggcgt cgcgttgtagcggcacgccgccgacgccatgatcgagcagttcgtcaatt tcgtcatccggccgcctcggtcagagtataacccagatcagtacttatgg gagagagagtttatgctcgcagggcgaaggtataaacgactagacttgga gctcacaaatccaaggggccataccttgaaatgcagccactatcttcctg cttccgttccagaaaatattgccctcccgtgtgtgatctactgccatgga aatagcggatgcagagcagacgcaaatgaagccgctgtagtacttcttcc ttcaaacatcacagttttcacactagacttttccggttcaggtctatcgg acggagatcatgtcagccttggttggcatgagaaagaggacctcaaatgt gcagtatcattcctgcgcaccaacaagcaagtttcccgtataggcctttg ggggcgatcgatgggtgctgttac

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.