No. words: 750; after pruning: 724


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 3.3 (1,1:198)  194  0.00 0.00 0.00  KSU049_F06_BE591150Ld14P006A05A111F1_038.ab1        6   199 (201)  C KSU049_F12_BE591150Ld14P006A05A111R1_086.ab1   (156)   194     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  98 nodes

 51 str. conn. components

Path
    1  C KSU049_F12_BE591150Ld14P006A05A111R1_086.ab1   350 
  252    KSU049_F06_BE591150Ld14P006A05A111F1_038.ab1   101 
Contig length: old 551, new 551

Contig length: old 551, new 551
New start: 0