No. words: 1591; after pruning: 1537 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 2 0.0 16.0 (1,1:769) 737 0.91 0.00 0.00 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 3 770 (25) C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 (28) 768 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 2 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 372 nodes 188 str. conn. components Path 1 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 796 45 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 19 373 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 424 377 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 351 385 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 412 389 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 363 457 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 340 461 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 435 473 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 324 509 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 483 513 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 284 521 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 495 529 C KSU009_A11_BQ168914At01P009G06G121R1_081.ab1 268 792 KSU008_A11_BQ168914At01P009G06G121F1_081.ab1 766 Contig length: old 821, new 821 Contig length: old 821, new 821 New start: 0