No. words: 1063; after pruning: 1037


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:396)  389  0.00 0.51 0.00  MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1        1   396 (148)  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   (121)   398     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   519 
  253    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   130 
  261  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   259 
  277    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   154 
  285  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   235 
  297    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   174 
  301  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   219 
  329    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   206 
  417  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1   103 
  433    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   310 
  445  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1    75 
  453    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   330 
  485  C MoSU005R_D10_BE352570Ld06P015G03G091R1_078.ab1    35 
  489    MoSU005F_D10_BE352570Ld06P015G03G091F1_078.ab1   366 
Contig length: old 666, new 667

Contig length: old 667, new 667
New start: 0