No. words: 1057; after pruning: 1031


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:395)  392  0.00 0.25 0.00  MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1        1   396 (142)  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   (122)   397     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   519 
  253    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   130 
  257  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   263 
  273    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   150 
  277  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   243 
  293    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   170 
  305  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   215 
  353    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   230 
  405  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   115 
  413    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   290 
  417  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1   103 
  421    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   298 
  485  C MoSU005R_H10_BE352570Ld10P015G03G091R1_080.ab1    35 
  489    MoSU005F_H10_BE352570Ld10P015G03G091F1_080.ab1   366 
Contig length: old 661, new 661

Contig length: old 661, new 661
New start: 0