No. words: 1560; after pruning: 1534


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:743)  714  0.00 0.27 0.00  MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1        1   743 (41)  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   (31)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   776 
   75    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1    42 
  123  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   654 
  127    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1    94 
  135  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   642 
  139    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1   106 
  147  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   630 
  155    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1   122 
  511  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1   266 
  711    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1   678 
  727  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1    50 
  743    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1   710 
  755  C MoSU017R_C12_BE352570Sn30P005A03P023G071R1_092.ab1    22 
  763    MoSU017F_C12_BE352570Sn30P005A03P023G071F1_092.ab1   730 
Contig length: old 816, new 817

Contig length: old 817, new 817
New start: 0