No. words: 1561; after pruning: 1535


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:797)  689  0.56 0.00 0.00  MoSU017F_C05_BE352570Ta13P023C06P005A091F1_043.ab1        1   718 (0)  C MoSU017R_C05_BE352570Ta13P023C06P005A091R1_043.ab1   (45)   798    81 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C MoSU017R_C05_BE352570Ta13P023C06P005A091R1_043.ab1   843 
   49    MoSU017F_C05_BE352570Ta13P023C06P005A091F1_043.ab1     4 
  134  C MoSU017R_C05_BE352570Ta13P023C06P005A091R1_043.ab1   710 
  138    MoSU017F_C05_BE352570Ta13P023C06P005A091F1_043.ab1    93 
  458  C MoSU017R_C05_BE352570Ta13P023C06P005A091R1_043.ab1   386 
Contig length: old 843, new 843

Contig length: old 843, new 843
New start: 0