No. words: 1155; after pruning: 1129


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:615)  455  0.61 0.00 0.20  MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1        1   491 (0)  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   (49)   615   126 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   664 
   61    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1    12 
   76  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   589 
   94    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1    46 
   98  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   567 
  102    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1    54 
  106  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   559 
  114    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1    66 
  130  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   535 
  134    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1    86 
  206  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   459 
  210    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1   162 
  222  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   443 
  226    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1   178 
  306  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   359 
  310    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1   262 
  330  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   335 
  354    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1   306 
  362  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   303 
  378    MoSU017F_H07_BE352570Td10P005A03P023B071F1_049.ab1   330 
  382  C MoSU017R_H07_BE352570Td10P005A03P023B071R1_049.ab1   283 
Contig length: old 664, new 664

Contig length: old 664, new 664
New start: 0