No. words: 1311; after pruning: 1285


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:492)  487  0.00 0.20 0.00  MoSU010F_C10_BE404240Ld05P018C03P018C091F1_076.ab1        1   493 (170)  C MoSU010R_C10_BE404240Ld05P018C03P018C091R1_076.ab1   (154)   494     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU010R_C10_BE404240Ld05P018C03P018C091R1_076.ab1   648 
  347    MoSU010F_C10_BE404240Ld05P018C03P018C091F1_076.ab1   192 
Contig length: old 818, new 818

Contig length: old 818, new 818
New start: 0