No. words: 1308; after pruning: 1282


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:486)  482  0.00 0.21 0.00  MoSU010F_D10_BE404240Ld06P018C03P018C091F1_074.ab1        1   487 (162)  C MoSU010R_D10_BE404240Ld06P018C03P018C091R1_074.ab1   (171)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU010R_D10_BE404240Ld06P018C03P018C091R1_074.ab1   659 
  207    MoSU010F_D10_BE404240Ld06P018C03P018C091F1_074.ab1    35 
  215  C MoSU010R_D10_BE404240Ld06P018C03P018C091R1_074.ab1   445 
  355    MoSU010F_D10_BE404240Ld06P018C03P018C091F1_074.ab1   183 
Contig length: old 821, new 821

Contig length: old 821, new 821
New start: 0