No. words: 1204; after pruning: 1178


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:487)  481  0.00 0.00 0.20  MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1        1   488 (63)  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   (166)   487     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   653 
  186    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1    20 
  190  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   464 
  202    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1    36 
  206  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   448 
  242    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1    76 
  246  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   408 
  282    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   116 
  286  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   368 
  358    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   192 
  450  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   204 
  454    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   288 
  534  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   120 
  538    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   372 
  546  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1   108 
  578    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   412 
  582  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1    72 
  602    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   436 
  606  C MoSU010R_H10_BE404240Ld10P018C03P018C091R1_066.ab1    48 
  638    MoSU010F_H10_BE404240Ld10P018C03P018C091F1_066.ab1   472 
Contig length: old 716, new 717

Contig length: old 717, new 717
New start: 0