No. words: 582; after pruning: 556


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.0 (1,1:232)  222  0.00 0.43 0.00  MoSU015F_F11_BE405835Ta16P023C03P005D091F1_085.ab1        1   233 (56)  C MoSU015R_F11_BE405835Ta16P023C03P005D091R1_085.ab1   (59)   234     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  114 nodes

 59 str. conn. components

Path
    1  C MoSU015R_F11_BE405835Ta16P023C03P005D091R1_085.ab1   293 
  180    MoSU015F_F11_BE405835Ta16P023C03P005D091F1_085.ab1   120 
  184  C MoSU015R_F11_BE405835Ta16P023C03P005D091R1_085.ab1   110 
  236    MoSU015F_F11_BE405835Ta16P023C03P005D091F1_085.ab1   176 
Contig length: old 349, new 349

Contig length: old 349, new 349
New start: 0