No. words: 529; after pruning: 503


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:213)  201  0.47 0.00 0.47  MoSU016F_A02_BE405835Td09P023G03P005D091F1_016.ab1        1   214 (60)  C MoSU016R_A02_BE405835Td09P023G03P005D091R1_016.ab1   (42)   213     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1  C MoSU016R_A02_BE405835Td09P023G03P005D091R1_016.ab1   255 
  234    MoSU016F_A02_BE405835Td09P023G03P005D091F1_016.ab1   192 
Contig length: old 315, new 316

Contig length: old 316, new 316
New start: 0 
S Change at: 246; seg lengths: entry 1, contig 1