No. words: 1335; after pruning: 1309


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:563)  526  0.89 0.18 0.00  MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1        1   564 (197)  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   (9)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   574 
   19    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1     9 
   43  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   532 
   59    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1    49 
   63  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   512 
  107    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1    97 
  179  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   396 
  187    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   177 
  203  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   372 
  235    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   225 
  255  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   320 
  271    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   261 
  279  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   296 
  439    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   429 
  447  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1   128 
  459    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   449 
  556  C MoSU009R_G03_BE426692Ld01P015D01P015D071R1_019.ab1    19 
  564    MoSU009F_G03_BE426692Ld01P015D01P015D071F1_019.ab1   554 
Contig length: old 771, new 771

Contig length: old 771, new 771
New start: 0