No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:626)  594  0.00 0.32 0.16  MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1        1   627 (46)  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1   (35)   628     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1   663 
   90    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1    53 
  106  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1   558 
  330    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   293 
  342  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1   322 
  546    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   509 
  550  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1   114 
  570    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   533 
  574  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1    90 
  594    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   557 
  598  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1    66 
  618    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   581 
  626  C MoSU026R_G05_BE442619Ta15P005H05P030D061R1_035.ab1    38 
  650    MoSU026F_G05_BE442619Ta15P005H05P030D061F1_035.ab1   613 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0