No. words: 1034; after pruning: 1008


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 10.0 (1,1:494)  463  0.00 0.00 0.00  MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1       17   495 (48)  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1   (12)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1   491 
   36    MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1    40 
   44  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1   448 
  100    MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1   104 
  232  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1   260 
  316    MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1   320 
  416  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1    76 
  440    MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1   444 
  444  C MoSU026R_F10_BE442619Ta16P030E05P005H111R1_070.ab1    48 
  448    MoSU026F_F10_BE442619Ta16P030E05P005H111F1_070.ab1   452 
Contig length: old 543, new 539

Contig length: old 539, new 539
New start: 0