No. words: 1027; after pruning: 1001


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:490)  464  0.00 0.41 0.00  MoSU026F_B11_BE442619Ta20P030E05P005H111F1_093.ab1        4   491 (46)  C MoSU026R_B11_BE442619Ta20P030E05P005H111R1_093.ab1   (0)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU026R_B11_BE442619Ta20P030E05P005H111R1_093.ab1   490 
  196    MoSU026F_B11_BE442619Ta20P030E05P005H111F1_093.ab1   197 
  416  C MoSU026R_B11_BE442619Ta20P030E05P005H111R1_093.ab1    75 
  436    MoSU026F_B11_BE442619Ta20P030E05P005H111F1_093.ab1   437 
  444  C MoSU026R_B11_BE442619Ta20P030E05P005H111R1_093.ab1    47 
  448    MoSU026F_B11_BE442619Ta20P030E05P005H111F1_093.ab1   449 
  460  C MoSU026R_B11_BE442619Ta20P030E05P005H111R1_093.ab1    31 
  464    MoSU026F_B11_BE442619Ta20P030E05P005H111F1_093.ab1   465 
Contig length: old 537, new 536

Contig length: old 536, new 536
New start: 0