No. words: 1462; after pruning: 1436


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:1034)  404  0.47 0.00 0.00  MoSU008F_B09_BE442619Tu02P005H05H111F1_077.ab1      306   732 (0)  C MoSU008R_B09_BE442619Tu02P005H05H111R1_077.ab1   (0)   730   304 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1    MoSU008F_B09_BE442619Tu02P005H05H111F1_077.ab1     1 
  517  C MoSU008R_B09_BE442619Tu02P005H05H111R1_077.ab1   519 
Contig length: old 1035, new 1035

Contig length: old 1035, new 1035
New start: 0