No. words: 559; after pruning: 533


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 4.4 (1,1:225)  203  1.35 0.00 0.00  MoSU032F_D03_BE442982Ta20P015C03P024E081F1_025.ab1        1   222 (51)  C MoSU032R_D03_BE442982Ta20P015C03P024E081R1_025.ab1   (60)   226     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1  C MoSU032R_D03_BE442982Ta20P015C03P024E081R1_025.ab1   286 
  127    MoSU032F_D03_BE442982Ta20P015C03P024E081F1_025.ab1    67 
  135  C MoSU032R_D03_BE442982Ta20P015C03P024E081R1_025.ab1   152 
  159    MoSU032F_D03_BE442982Ta20P015C03P024E081F1_025.ab1    99 
Contig length: old 333, new 333

Contig length: old 333, new 333
New start: 0