No. words: 1339; after pruning: 1299


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.9 (1,1:566)  552  0.00 0.18 0.18  MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1        5   567 (63)  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   (146)   563     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   709 
  176    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1    33 
  196  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   514 
  204    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1    61 
  216  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   494 
  248    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   105 
  252  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   458 
  256    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   113 
  312  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   398 
  316    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   173 
  476  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   234 
  480    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   337 
  508  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   202 
  512    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   369 
  520  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   190 
  524    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   381 
  532  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   178 
  548    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   405 
  564  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   146 
  584    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   441 
  596  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1   114 
  624    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   481 
  628  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1    82 
  632    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   489 
  636  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1    74 
  656    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   513 
  660  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1    50 
  668    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   525 
  680  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1    30 
  684    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   541 
  692  C MoSU007R_G11_BE443312Ld03P015H05H111R1_083.ab1    18 
  696    MoSU007F_G11_BE443312Ld03P015H05H111F1_083.ab1   553 
Contig length: old 772, new 773

Contig length: old 773, new 773
New start: 0 
S Change at: 60; seg lengths: entry 1, contig 1