No. words: 1493; after pruning: 1467


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:704)  694  0.00 0.00 0.14  MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1        1   705 (35)  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   (49)   704     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   753 
   54    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1     5 
  558  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   196 
  578    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   529 
  582  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   172 
  590    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   541 
  598  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   156 
  610    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   561 
  614  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   140 
  630    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   581 
  638  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1   116 
  646    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   597 
  670  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1    84 
  730    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   681 
  738  C MoSU018R_H03_BE443312Sn24P023A08P005H091R1_017.ab1    17 
  750    MoSU018F_H03_BE443312Sn24P023A08P005H091F1_017.ab1   701 
Contig length: old 788, new 789

Contig length: old 789, new 789
New start: 0