No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.2 (1,1:644)  606  0.16 0.00 0.00  MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1       26   639 (38)  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   (0)   620     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1     1 
  340  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   306 
  352    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   352 
  380  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   266 
  392    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   392 
  416  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   230 
  428    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   428 
  436  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   210 
  444    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   444 
  460  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1   186 
  576    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   576 
  580  C MoSU018R_C08_BE443312Ta21P005H03P023D091R1_060.ab1    66 
  628    MoSU018F_C08_BE443312Ta21P005H03P023D091F1_060.ab1   628 
Contig length: old 677, new 677

Contig length: old 677, new 677
New start: 0