No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:662)  611  0.00 0.00 0.00  MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1        1   619 (0)  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   (58)   663    45 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   721 
   70    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1    12 
   74  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   648 
  102    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1    44 
  110  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   612 
  114    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1    56 
  130  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   592 
  150    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1    92 
  302  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   420 
  306    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   248 
  498  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   224 
  506    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   448 
  518  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   204 
  530    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   472 
  534  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   188 
  538    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   480 
  542  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   180 
  546    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   488 
  550  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   172 
  554    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   496 
  558  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   164 
  566    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   508 
  578  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   144 
  582    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   524 
  594  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   128 
  602    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   544 
  610  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1   112 
  626    MoSU018F_B02_BE443312Td10P023A08P005H091F1_014.ab1   568 
  634  C MoSU018R_B02_BE443312Td10P023A08P005H091R1_014.ab1    88 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0