No. words: 1422; after pruning: 1396


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 14.3 (1,1:673)  658  0.00 0.00 0.00  MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1        4   674 (33)  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   (44)   671     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  338 nodes

 171 str. conn. components

Path
    1  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   715 
   72    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1    31 
   80  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   636 
  108    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1    67 
  136  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   580 
  560    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   519 
  568  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   148 
  592    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   551 
  604  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1   112 
  616    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   575 
  628  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1    88 
  632    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   591 
  636  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1    80 
  676    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   635 
  680  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1    36 
  692    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   651 
  700  C MoSU023R_C05_BE443596As01P019D02P019D081R1_043.ab1    16 
  704    MoSU023F_C05_BE443596As01P019D02P019D081F1_043.ab1   663 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0