No. words: 1379; after pruning: 1353


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.5 (1,1:1164)  167  6.54 0.00 0.00  MoSU035F_C11_BE445287As01P019B05P019B111F1_091.ab1      455   668 (0)  C MoSU035R_C11_BE445287As01P019B05P019B111R1_091.ab1   (0)   711   498 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1    MoSU035F_C11_BE445287As01P019B05P019B111F1_091.ab1     1 
  650  C MoSU035R_C11_BE445287As01P019B05P019B111R1_091.ab1   516 
Contig length: old 1165, new 1165

Contig length: old 1165, new 1165
New start: 0