No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 11.7 (1,1:728)  684  0.00 0.14 0.14  MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1        4   722 (30)  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   (34)   726     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   760 
   70    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1    38 
  110  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   651 
  114    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1    82 
  162  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   599 
  178    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   146 
  242  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   519 
  250    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   218 
  258  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   503 
  266    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   234 
  270  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   491 
  274    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   242 
  278  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   483 
  286    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   254 
  294  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   467 
  318    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   286 
  326  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   435 
  350    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   318 
  354  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   407 
  634    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   602 
  650  C MoSU021R_D08_BE446380Ta12P020B11P005G111R1_058.ab1   111 
  698    MoSU021F_D08_BE446380Ta12P020B11P005G111F1_058.ab1   666 
Contig length: old 783, new 784

Contig length: old 784, new 784
New start: 0