No. words: 1500; after pruning: 1474


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.7 (1,1:717)  679  0.00 0.28 0.00  MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1        4   717 (33)  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   (34)   716     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   750 
   90    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1    57 
  126  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   625 
  154    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   121 
  158  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   593 
  170    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   137 
  226  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   525 
  234    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   201 
  238  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   513 
  350    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   317 
  354  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   397 
  494    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   461 
  550  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   201 
  614    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   581 
  650  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1   101 
  654    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   621 
  670  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1    81 
  690    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   657 
  694  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1    57 
  714    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   681 
  734  C MoSU021R_F08_BE446380Ta14P020B11P005G111R1_054.ab1    17 
  738    MoSU021F_F08_BE446380Ta14P020B11P005G111F1_054.ab1   705 
Contig length: old 782, new 783

Contig length: old 783, new 783
New start: 0