No. words: 1609; after pruning: 1583


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:775)  744  0.13 0.13 0.00  MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1        1   761 (0)  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   (71)   777    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  378 nodes

 191 str. conn. components

Path
    1  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   848 
   75    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1     4 
   79  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   770 
   88    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1    16 
  104  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   745 
  108    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1    36 
  224  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   625 
  228    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   156 
  348  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   501 
  352    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   280 
  460  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   389 
  464    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   392 
  480  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   369 
  484    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   412 
  488  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   361 
  492    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   420 
  496  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   353 
  504    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   432 
  524  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   325 
  532    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   460 
  540  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   309 
  548    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   476 
  576  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   273 
  584    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   512 
  588  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   261 
  600    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   528 
  604  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   245 
  612    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   540 
  616  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   233 
  664    MoSU006F_G05_BE471272Ld01P015D04D101F1_036.ab1   592 
  668  C MoSU006R_G05_BE471272Ld01P015D04D101R1_036.ab1   181 
Contig length: old 848, new 848

Contig length: old 848, new 848
New start: 0