No. words: 1006; after pruning: 980


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:462)  436  0.00 0.43 0.43  MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1        1   464 (42)  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   (36)   464     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   500 
   51    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1    13 
   55  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   446 
   87    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1    49 
   91  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   410 
  139    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   101 
  143  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   358 
  179    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   141 
  187  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   314 
  195    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   157 
  199  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   302 
  219    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   181 
  227  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   274 
  231    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   193 
  247  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   254 
  255    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   217 
  271  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   230 
  291    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   253 
  295  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   206 
  335    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   297 
  343  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   158 
  395    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   357 
  399  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1   102 
  443    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   405 
  447  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1    54 
  459    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   421 
  463  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1    38 
  467    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   429 
  471  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1    30 
  475    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   437 
  479  C MoSU015R_E01_BE471272Td05P005B03P023B021R1_007.ab1    22 
  483    MoSU015F_E01_BE471272Td05P005B03P023B021F1_007.ab1   445 
Contig length: old 543, new 544

Contig length: old 544, new 544
New start: 0