No. words: 1493; after pruning: 1467


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:707)  700  0.00 0.00 0.00  MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1        1   708 (42)  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   (35)   708     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   743 
   39    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1     4 
   55  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   689 
   59    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1    24 
   87  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   657 
   91    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1    56 
  403  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   341 
  407    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   372 
  411  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   333 
  427    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   392 
  435  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   309 
  439    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   404 
  447  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   297 
  451    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   416 
  459  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   285 
  475    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   440 
  487  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   257 
  495    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   460 
  503  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   241 
  511    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   476 
  515  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   229 
  523    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   488 
  527  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   217 
  535    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   500 
  539  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   205 
  587    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   552 
  591  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1   153 
  731    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   696 
  735  C MoSU006R_B05_BE471272Tu02P015D04D101R1_041.ab1     9 
  739    MoSU006F_B05_BE471272Tu02P015D04D101F1_041.ab1   704 
Contig length: old 785, new 785

Contig length: old 785, new 785
New start: 0