No. words: 1025; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:343)  328  0.00 0.29 0.29  MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1        1   344 (170)  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1   (167)   344     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1   511 
  289    MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1   121 
  317  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1   195 
  365    MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1   197 
  369  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1   143 
  409    MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1   241 
  421  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1    91 
  441    MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1   273 
  449  C MoSU014R_G04_BE488496Ld09P018B03P018B091R1_020.ab1    63 
  473    MoSU014F_G04_BE488496Ld09P018B03P018B091F1_020.ab1   305 
Contig length: old 681, new 682

Contig length: old 682, new 682
New start: 0