No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:586)  573  0.17 0.00 0.00  MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1        1   587 (41)  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   (132)   587     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   719 
  342    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   210 
  346  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   374 
  382    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   250 
  386  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   334 
  406    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   274 
  410  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   310 
  482    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   350 
  486  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1   234 
  626    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   494 
  634  C MoSU023R_D10_BE490007Ld06P019G02P019G081R1_074.ab1    86 
  714    MoSU023F_D10_BE490007Ld06P019G02P019G081F1_074.ab1   582 
Contig length: old 760, new 760

Contig length: old 760, new 760
New start: 0