No. words: 1393; after pruning: 1367


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:549)  535  0.00 0.00 0.18  MoSU023F_H10_BE490007Ld10P019G02P019G081F1_066.ab1        1   550 (83)  C MoSU023R_H10_BE490007Ld10P019G02P019G081R1_066.ab1   (211)   549     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C MoSU023R_H10_BE490007Ld10P019G02P019G081R1_066.ab1   760 
  523    MoSU023F_H10_BE490007Ld10P019G02P019G081F1_066.ab1   312 
  527  C MoSU023R_H10_BE490007Ld10P019G02P019G081R1_066.ab1   234 
  755    MoSU023F_H10_BE490007Ld10P019G02P019G081F1_066.ab1   545 
Contig length: old 843, new 843

Contig length: old 843, new 844
New start: 0 
I Change at: 733; seg lengths: entry 1, contig 0