No. words: 1324; after pruning: 1298


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:1034)  282  0.35 0.00 0.00  MoSU010F_E06_BE490219Ld07P018H01P018H071F1_040.ab1      278   566 (0)  C MoSU010R_E06_BE490219Ld07P018H01P018H071R1_040.ab1   (0)   758   470 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1    MoSU010F_E06_BE490219Ld07P018H01P018H071F1_040.ab1     1 
  425  C MoSU010R_E06_BE490219Ld07P018H01P018H071R1_040.ab1   611 
  429    MoSU010F_E06_BE490219Ld07P018H01P018H071F1_040.ab1   429 
  445  C MoSU010R_E06_BE490219Ld07P018H01P018H071R1_040.ab1   591 
  457    MoSU010F_E06_BE490219Ld07P018H01P018H071F1_040.ab1   457 
  461  C MoSU010R_E06_BE490219Ld07P018H01P018H071R1_040.ab1   575 
Contig length: old 1035, new 1035

Contig length: old 1035, new 1035
New start: 0