No. words: 1457; after pruning: 1431


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:838)  599  0.00 0.00 0.00  MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1      141   758 (0)  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   (0)   699    82 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1     1 
  308  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   532 
  312    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   312 
  356  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   484 
  364    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   364 
  380  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   460 
  388    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   388 
  432  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   408 
  452    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   452 
  456  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   384 
  460    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   460 
  464  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   376 
  468    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   468 
  472  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   368 
  488    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   488 
  504  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   336 
  520    MoSU005F_G02_BE490219Ld09P015G01G071F1_008.ab1   520 
  524  C MoSU005R_G02_BE490219Ld09P015G01G071R1_008.ab1   316 
Contig length: old 839, new 839

Contig length: old 839, new 839
New start: 0