No. words: 1249; after pruning: 1223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:612)  555  0.17 0.00 0.00  MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1        1   575 (0)  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   (61)   613    39 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   674 
  133    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1    72 
  141  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   534 
  149    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1    88 
  161  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   514 
  173    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   112 
  177  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   498 
  189    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   128 
  217  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   458 
  225    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   164 
  229  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   446 
  237    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   176 
  241  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   434 
  245    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   184 
  249  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   426 
  257    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   196 
  265  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   410 
  269    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   208 
  273  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   402 
  285    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   224 
  309  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   366 
  313    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   252 
  329  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   346 
  333    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   272 
  341  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   334 
  353    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   292 
  357  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   318 
  361    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   300 
  365  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   310 
  369    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   308 
  373  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   302 
  413    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   352 
  425  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   250 
  505    MoSU033F_C05_BE490219Ta11P024E10P015G071F1_043.ab1   444 
  517  C MoSU033R_C05_BE490219Ta11P024E10P015G071R1_043.ab1   158 
Contig length: old 674, new 674

Contig length: old 674, new 674
New start: 0