No. words: 1488; after pruning: 1448


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:730)  702  0.41 0.14 0.00  MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1        1   731 (17)  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   (8)   732     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1     1 
  118  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   614 
  122    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   122 
  150  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   582 
  178    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   178 
  190  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   542 
  194    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   194 
  198  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   534 
  210    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   210 
  230  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   502 
  250    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   250 
  254  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   478 
  266    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   266 
  294  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   438 
  318    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   318 
  338  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   394 
  342    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   342 
  362  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   370 
  370    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   370 
  374  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   358 
  382    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   382 
  386  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   346 
  394    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   394 
  402  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   330 
  414    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   414 
  422  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   310 
  430    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   430 
  454  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   278 
  550    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   550 
  562  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   170 
  574    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   574 
  578  C MoSU033R_A10_BE490219Ta11P024F10P015G071R1_080.ab1   154 
  726    MoSU033F_A10_BE490219Ta11P024F10P015G071F1_080.ab1   726 
Contig length: old 757, new 748

Contig length: old 748, new 749
New start: 0 
I Change at: 8; seg lengths: entry 1, contig 0