No. words: 1118; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:508)  471  0.39 0.79 0.20  MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1        1   509 (52)  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   (45)   512     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   557 
   99    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1    50 
  142  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   416 
  146    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1    97 
  154  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   404 
  162    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1   113 
  208  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   350 
  212    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1   163 
  352  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   206 
  400    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1   351 
  432  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1   126 
  468    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1   419 
  472  C MoSU033R_G02_BE490219Ta15P024C10P015G071R1_004.ab1    86 
  476    MoSU033F_G02_BE490219Ta15P024C10P015G071F1_004.ab1   427 
Contig length: old 609, new 610

Contig length: old 610, new 610
New start: 0