No. words: 1498; after pruning: 1472


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 15.3 (1,1:741)  705  0.00 0.00 0.00  MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1       18   740 (33)  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   (0)   725     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1     1 
   21  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   722 
   29    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1    29 
   49  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   694 
   53    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1    53 
   61  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   682 
   65    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1    65 
   93  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   650 
   97    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1    97 
  157  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   586 
  321    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1   321 
  497  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   246 
  573    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1   573 
  593  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1   150 
  645    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1   645 
  653  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1    90 
  705    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1   705 
  725  C MoSU033R_E10_BE490219Ta15P024F10P015G071R1_072.ab1    18 
  733    MoSU033F_E10_BE490219Ta15P024F10P015G071F1_072.ab1   733 
Contig length: old 773, new 773

Contig length: old 773, new 773
New start: 0