No. words: 1302; after pruning: 1276


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:622)  603  0.16 0.00 0.00  MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1        1   623 (19)  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   (37)   623     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   660 
  137    MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1   100 
  161  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   500 
  193    MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1   156 
  385  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   276 
  393    MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1   356 
  501  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   160 
  505    MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1   468 
  509  C MoSU033R_A06_BE490219Ta17P024E10P015G071R1_048.ab1   152 
  649    MoSU033F_A06_BE490219Ta17P024E10P015G071F1_048.ab1   612 
Contig length: old 679, new 679

Contig length: old 679, new 679
New start: 0 
S Change at: 655; seg lengths: entry 1, contig 1