No. words: 1095; after pruning: 1041


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 8.6 (1,1:506)  476  0.40 0.20 0.00  MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1        9   507 (44)  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   (44)   500     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   544 
   81    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1    44 
  124  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   421 
  148    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   111 
  152  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   393 
  156    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   119 
  164  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   381 
  168    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   131 
  270  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   275 
  278    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   241 
  302  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   243 
  386    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   349 
  394  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   151 
  414    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   377 
  426  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1   119 
  434    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   397 
  450  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1    95 
  454    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   417 
  466  C MoSU033R_F03_BE490219Ta22P024C10P015G071R1_021.ab1    79 
  482    MoSU033F_F03_BE490219Ta22P024C10P015G071F1_021.ab1   445 
Contig length: old 588, new 588

Contig length: old 588, new 588
New start: 0