No. words: 1583; after pruning: 1557


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:636)  614  0.00 0.16 0.00  MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1        1   637 (158)  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   (150)   638     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   788 
  388    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   237 
  504  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   285 
  536    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   385 
  564  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   225 
  616    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   465 
  636  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   153 
  640    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   489 
  644  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1   145 
  656    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   505 
  768  C MoSU024R_D12_BE493868Ld05P019C06P019C121R1_090.ab1    21 
  772    MoSU024F_D12_BE493868Ld05P019C06P019C121F1_090.ab1   621 
Contig length: old 946, new 946

Contig length: old 946, new 946
New start: 0